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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808973.1_cds_XP_016495574.1_9878
CDS Infomation

[gene=LOC107814646] [db_xref=GeneID:107814646] [protein=protein IQ-DOMAIN 1-like isoform X2] [protein_id=XP_016495574.1] [location=complement(join(11550..12200,12323..12685,12824..13129,14079..14159))] [gbkey=CDS]
Sequence

ATGGGCAAGAAAGGAAGTGGTTGGTTTTCGTCAGTGAAGAAAGTTTTCAAACATTCTCCC
AAGGATTCACCAGAGAAGAAGAAGGAAACATCAGACAGCAAATGGCAACCTGAAGCTCCA
GAAGTTGTGTCACTTGAACATTTTCCAGCAGGGAGTTCTCCAGATCTCATTAGTAATGGA
GAGAGCAACATCGATTCATCGTCTACGGTGGCGGAAGATCATAACCATGCCGTTGCTGTA
GCAGTGGCCACTGCTGCAGCCGCTGAGGCAGCTGTCGCAGCTGCTCAAGCGGCTGCTAAA
GTGGTTAGATTAGCTGGTGGCTATGGCCGCGAGACCACAGAGGAAAGAGCTGCCACGCTT
ATTCAATCATACTACAGGGGATATCTGGCAAGGCGTGCTTTGCGCGCTCTGAAAGGATTG
GTAAGGCTGCAAGCACTAGTGAGGGGACATAATGTGCGGAAACAAGCACAAATGACAATG
AGATGCATGCAAGCATTAGTACGTGTTCAGGCCAGAGTACGAGCAAGAAGACTCCAGTTA
GTACAGGAAAAGCTAGAGAGCAAGCTAGAAGAAGCACGAAGGCACGCTAATGAACAACAA
CACAAGCACACCAGCCCCATAAGTAAGTTAGAGACAGAAGGTTGGGATAACAGGAACAAA
AGCATGGACAAGATCCAAGAAAGTAGTAGGAGAAAATATGATGCTGAAATGAAAAGGGAA
AGAGCTCTTTCTTATGCCTTTGCCTATCAGCAAAAGCAGCAACAACTATTGCTCGTCGAT
CAACATGGCGAGGACCCGGATGTCTTTGCCAATGAGCGCGAAAAGTCGCAATGGGGTTGG
AGTTGGCTGGAGCGTTGGATGGCTTCGCAACCATACCAATACTCAAGACACATTGTGCCA
AGGGACAACTCCTATGTGACACTTTCCACCACAAGTGACATGTCTGAGAAGACAGTAGAA
ATGGATCTAGTCACCGGCCCATTGGGCTCAGAGAATGTCAACTCAGCCCGTCACGCTTTC
GACAAAGCTGAAACAAGCCCATATTCGGCCCGGCAACAACGTCAATCAAACTCTGACACC
GTCCCTAGTTACATGGCCCCAACTCAATCTGCAAAAGCTAAGGTTAGGAGTCAAGGCTAT
GTTAAACATCGTAGCCCACCATCGGCCCAATGGAATACATCAACAAAGAAGGGGACACAC
TACGGATTGGGCCTTGAATCAAGCTCTGGAGCAAGTACAACAGCAATCTATCAAGTCTCG
AGAAGCCCGAGCCCAAAAAGTAGTGCAAATCGTAGTAGTGGACATGCTAATAAATGGATG
GCAACGTACAGTCCAGAATCAAGTGGCGATGATCGGGCTTCACCATTAGGAGTACATGGC
AGGAGATATAATTTTAGTTGA

Peptide Sequence

PEP ID

XP_016495574.1
PEP Infomation

PREDICTED: protein IQ-DOMAIN 1-like isoform X2 [Nicotiana tabacum]
Sequence

MGKKGSGWFSSVKKVFKHSPKDSPEKKKETSDSKWQPEAPEVVSLEHFPAGSSPDLISNG
ESNIDSSSTVAEDHNHAVAVAVATAAAAEAAVAAAQAAAKVVRLAGGYGRETTEERAATL
IQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQL
VQEKLESKLEEARRHANEQQHKHTSPISKLETEGWDNRNKSMDKIQESSRRKYDAEMKRE
RALSYAFAYQQKQQQLLLVDQHGEDPDVFANEREKSQWGWSWLERWMASQPYQYSRHIVP
RDNSYVTLSTTSDMSEKTVEMDLVTGPLGSENVNSARHAFDKAETSPYSARQQRQSNSDT
VPSYMAPTQSAKAKVRSQGYVKHRSPPSAQWNTSTKKGTHYGLGLESSSGASTTAIYQVS
RSPSPKSSANRSSGHANKWMATYSPESSGDDRASPLGVHGRRYNFS

Transcript Sequence

Gene sequence data has not been registered.